Insertion junction: LMJ.RY0402.214609_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.214609
Chromosome:chromosome 9
Location:6940903
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAGTTTGACTCGGCGGGCGTGGTGAAG
Internal bar code:ACGTGTGGGGCACAACTCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:774
LEAP-Seq percent confirming:99.6011
LEAP-Seq n confirming:4494
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCAGGAACACAACCTATT
Suggested primer 2:CGTGACGTTCCATTTGTGTC