Insertion junction: LMJ.RY0402.214633_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.214633
Chromosome:chromosome 3
Location:5668085
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g187550 (1 of 1) PF04858 - TH1 protein (TH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTGGTTGGGAGCGGCCTGGAAGCGGG
Internal bar code:AGAGGCTTCGGGAGCTCAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:277
LEAP-Seq percent confirming:91.625
LEAP-Seq n confirming:8796
LEAP-Seq n nonconfirming:804
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATGGCGAAGTTGAGCAG
Suggested primer 2:CGGAAATGGTGAGCAAGTTT