Insertion junction: LMJ.RY0402.214681_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.214681
Chromosome:chromosome 3
Location:3488012
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g167622 3'UTR
Cre03.g167644 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCCCTAGGGGCACGCCCCCCAAACCCC
Internal bar code:AGGGCCAGAGGAGGACCTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:898
LEAP-Seq percent confirming:99.864
LEAP-Seq n confirming:1469
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGAGTGCGTTGGGGTAT
Suggested primer 2:GGTTTCTGCACTTCTGCTCC