Insertion junction: LMJ.RY0402.214729_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.214729
Chromosome:chromosome 9
Location:2272504
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g392500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGATTGGCTGCCGCTGCCATATTTCCC
Internal bar code:CTAGCGCACCACACCTGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:705
LEAP-Seq percent confirming:13.0785
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:432
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGACCAGACATTCCAGT
Suggested primer 2:ACATGCCGTCCTTTTGTTTC