Insertion junction: LMJ.RY0402.214779_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.214779
Chromosome:chromosome 4
Location:340140
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g217908 FAP79 Ankyrin Repeat Flagellar Associated Protein 79; (1 of 1) PTHR24133//PTHR24133:SF21//PTHR24198 - FAMILY NOT NAMED // ANKYRIN REPEAT-CONTAINING PROTEIN // ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCATGCAGGGCCGAGGGTCGGGACTCC
Internal bar code:CCTTAGAGGTCAGCTCTTGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1257
LEAP-Seq percent confirming:79.8069
LEAP-Seq n confirming:4711
LEAP-Seq n nonconfirming:1192
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTCACTAAGGCGTCCA
Suggested primer 2:GGACAGGATCCAAGAGGTGA