Insertion junction: LMJ.RY0402.214825_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.214825
Chromosome:chromosome 11
Location:2062542
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGATCAAGGACGCCTGGCCAATCTTGA
Internal bar code:CAGGGGGCCGGACGACAGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:604
LEAP-Seq percent confirming:99.8698
LEAP-Seq n confirming:1534
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCCAACACAAGTTCCAT
Suggested primer 2:GTACGGCACACACCTTGATG