Insertion junction: LMJ.RY0402.214841_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.214841
Chromosome:chromosome 3
Location:5530211
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g186100 (1 of 13) IPR005123//IPR006620 - Oxoglutarate/iron-dependent dioxygenase // Prolyl 4-hydroxylase, alpha subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGGTGTGTGGCGCCGGCATCCTGGCGG
Internal bar code:ACGGTTTGCCCGGGAGTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1057
LEAP-Seq percent confirming:94.356
LEAP-Seq n confirming:13391
LEAP-Seq n nonconfirming:801
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACATCTCCCCAAACTT
Suggested primer 2:TGAGAACTGGGGATCAGGAC