Insertion junction: LMJ.RY0402.214939_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.214939
Chromosome:chromosome 9
Location:6650236
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g408700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCCTGCCTTGCGCCTTACTAAACTTAC
Internal bar code:GTAGCCAAGGGCAACGCATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:690
LEAP-Seq percent confirming:79.5612
LEAP-Seq n confirming:2176
LEAP-Seq n nonconfirming:559
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGCTTCTGTGTGTGTG
Suggested primer 2:GAGAGAGGCGTTGAAGTTGG