Insertion junction: LMJ.RY0402.214963_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.214963
Chromosome:chromosome 3
Location:7971863
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGCTCCATGCAGGCCTCCCATACTGG
Internal bar code:GCGCTTGCAATGAGGGAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:407
LEAP-Seq percent confirming:96.6438
LEAP-Seq n confirming:1411
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGACACAGACCGCATC
Suggested primer 2:CCTCTGCAGTCCTCCAACTC