Insertion junction: LMJ.RY0402.215044_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.215044
Chromosome:chromosome 3
Location:4850655
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g179100 UFD1b UFD1b homolog; (1 of 1) PF00789//PF03152 - UBX domain (UBX) // Ubiquitin fusion degradation protein UFD1 (UFD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCCCGAACCCAGAGTTCAAGGGGATAC
Internal bar code:GCGTCATCAATCCGCCAGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:473
LEAP-Seq percent confirming:82.1297
LEAP-Seq n confirming:7597
LEAP-Seq n nonconfirming:1653
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCAATCTCCGCTCCACC
Suggested primer 2:TCCCAATCCCACTCTCACTC