Insertion junction: LMJ.RY0402.215045_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.215045
Chromosome:chromosome 1
Location:4059731
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g026500 ASP3 (1 of 2) 3.4.23.12 - Nepenthesin / Nepenthes aspartic proteinase; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCGAGACCGTCTGTCCCGGCGTCCCG
Internal bar code:ATGATCCGGCCTGGTCTGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:16
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGGAGAATGCGTCATC
Suggested primer 2:AACTGGGTTGGCTTACAACG