Insertion junction: LMJ.RY0402.215293_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.215293
Chromosome:chromosome_13
Location:3741421
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre13.g589450 sense 5'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):GAGGCGCGGGGAAGTGGTTTGCGAAAAAGC
Internal bar code:TCCTGCTCCAGCTGTAATGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1061
LEAP-Seq percent confirming:80.5804
LEAP-Seq n confirming:722
LEAP-Seq n nonconfirming:174
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AACATGCCTGGTTGTAAGCC
Suggested primer 2:GAGGTAGCTGAACTCCACCG