Insertion junction: LMJ.RY0402.215298_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.215298
Chromosome:chromosome 1
Location:2954029
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCTGCTGCAGCTGCTGCTGATGTTGC
Internal bar code:GTGAGCGTTTAGCTTAAGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1028
LEAP-Seq percent confirming:99.2776
LEAP-Seq n confirming:6322
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCTATCTCCTGCCTGC
Suggested primer 2:GCTGGGTGCGGTATAAGGTA