Insertion junction: LMJ.RY0402.215298_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.215298
Chromosome:chromosome 1
Location:2954252
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTCACCGTTCCCGGCCTGGTCGTGGC
Internal bar code:GCGGTCGGCTCCCCACCATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:94.767
LEAP-Seq n confirming:18182
LEAP-Seq n nonconfirming:1004
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCTATCTCCTGCCTGC
Suggested primer 2:GCTGGGTGCGGTATAAGGTA