Insertion junction: LMJ.RY0402.215333_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.215333
Chromosome:chromosome 16
Location:4323245
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACTTGGCGACTGTCCTTTCTGCCTCCT
Internal bar code:GGAGCATAAATTTGCCGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:55.6059
LEAP-Seq n confirming:2946
LEAP-Seq n nonconfirming:2352
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCGGTGGTCTTTGTTAT
Suggested primer 2:AAGCTTGCGAACACCCATAC