Insertion junction: LMJ.RY0402.215488_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.215488
Chromosome:chromosome 4
Location:3860379
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g230144 SPT1 Component of serine palmitoyltransferase; (1 of 1) PTHR13693//PTHR13693:SF3 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // LD36009P 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATCAGTAGTACGGTACGTGACGAGTCC
Internal bar code:GCCTGTGCATGAGCCCTCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:98.9151
LEAP-Seq n confirming:4194
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGAGGGTTTTGAGCAGC
Suggested primer 2:ATGTGAAGGCCTACATTCGC