Insertion junction: LMJ.RY0402.215493_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.215493
Chromosome:chromosome 5
Location:2572203
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236050 (1 of 2) IPR015097 - Lung surfactant protein D coiled-coil trimerisation CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCGCGGCAGCACGCCTGGCGGCGGCTC
Internal bar code:AGAAAGGGTTGTAGGGCCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:45
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTGGTTTGATGTTCTG
Suggested primer 2:TACTGAGCGTGTCGAGTTGG