Insertion junction: LMJ.RY0402.215645_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.215645
Chromosome:chromosome 17
Location:6685506
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g744097 GT90F49,GT90-49 GT90 family protein 49; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGCTGGAACTTACGACACACCGCCCCC
Internal bar code:GCTAACTTCGCGCGGTCGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:98.0037
LEAP-Seq n confirming:5253
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCATGCTCTCGCCTTCAT
Suggested primer 2:TTGTCTGACACCTTTGCAGC