Insertion junction: LMJ.RY0402.215796_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.215796
Chromosome:chromosome 12
Location:7298950
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g557500 (1 of 1) IPR000104//IPR002073//IPR003607//IPR006189//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // HD/PDEase domain // CHASE domain // 3'5'-cyclic nucleotide phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTGGGCTGGACTGCTTCGCTTGGTTGG
Internal bar code:AACAATGCCTTCCTCAAGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:99.3607
LEAP-Seq n confirming:6839
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTAGTCACGCCACTGAA
Suggested primer 2:GGCATGCCGTTACGATACTT