Insertion junction: LMJ.RY0402.215864_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.215864
Chromosome:chromosome 9
Location:1830142
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGCCATGCCCCCAATCTACATCAACA
Internal bar code:GGGGAGTCTCGCAGCTCACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:898
LEAP-Seq percent confirming:99.8351
LEAP-Seq n confirming:2421
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTGACAGCCTCCTCCT
Suggested primer 2:TTCGTGCCTCTCTTCAGGTT