Insertion junction: LMJ.RY0402.215948_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.215948
Chromosome:chromosome 9
Location:5091070
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g398586 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGGGCGGGGGGGGGTAGGAAACAAAG
Internal bar code:GAGCATCACGCTTACCCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:70.1566
LEAP-Seq n confirming:717
LEAP-Seq n nonconfirming:305
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGCCATATGCTACAAGC
Suggested primer 2:CGAGATTGCTCCCTACAAGC