Insertion junction: LMJ.RY0402.216214_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.216214
Chromosome:chromosome 3
Location:5377189
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAGAGCGCGCTTGCGCGCCTCTGCCAC
Internal bar code:GAGCGTCGTTCGGTGATAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1013
LEAP-Seq percent confirming:99.4817
LEAP-Seq n confirming:3071
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAGCTCCTGTAGACC
Suggested primer 2:CTACTCATGGCCCGTCAAAT