Insertion junction: LMJ.RY0402.216263_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.216263
Chromosome:chromosome 2
Location:992578
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g080300 (1 of 5) PTHR10791 - RAG1-ACTIVATING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCGCAGTGCGGCGTAGTAGAGCACCA
Internal bar code:CTAAGATGCCTGCGTTGCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:99.0175
LEAP-Seq n confirming:3225
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCGACATCATGTGCTAC
Suggested primer 2:AGTTCGGATGTGTCCCTGTC