Insertion junction: LMJ.RY0402.216697_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.216697
Chromosome:scaffold 50
Location:7263
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre50.g761447 (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGTGTTTCGTGGCTGGACAGAGGAGGC
Internal bar code:CGGTCCCCCCTGCTATCCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:963
LEAP-Seq percent confirming:99.6618
LEAP-Seq n confirming:2947
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCAGATCGAGTCAAGC
Suggested primer 2:CCTCTGTCCGTACGTGTGTG