Insertion junction: LMJ.RY0402.216804_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.216804
Chromosome:chromosome 17
Location:4849185
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g734134 3'UTR
Cre17.g734142 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGTGCCAGGATAGATGTAATGCGTGGG
Internal bar code:CTGTGGATATCAGGTGAGAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:205
LEAP-Seq percent confirming:70.9677
LEAP-Seq n confirming:132
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCATTTTCAGCAGCCAT
Suggested primer 2:TGGTCGAGTTGATGTTTCCA