Insertion junction: LMJ.RY0402.216863_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.216863
Chromosome:chromosome 12
Location:8743865
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g545800 ROC55,ROC11 Rhythm Of Chloroplast 55; (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAACAGCCATGACAGCAACATCCTCATT
Internal bar code:GTGATCGAGCGAAGGGACGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:863
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:284
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCTGGCAGATTTAGCCG
Suggested primer 2:CATCGAACTGTTACCGCTGA