Insertion junction: LMJ.RY0402.217036_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.217036
Chromosome:chromosome 13
Location:3916845
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCCAAGGCCTTCCGACGTCTCCCACA
Internal bar code:CTGTAATCTGCCTCCGGATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1054
LEAP-Seq percent confirming:85.5693
LEAP-Seq n confirming:759
LEAP-Seq n nonconfirming:128
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGTTCGTGCTGGACAA
Suggested primer 2:AATCGCACTCCCGTACTTTG