Insertion junction: LMJ.RY0402.217041_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.217041
Chromosome:chromosome 11
Location:2882916
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g477850 TXC1,TSN1 (1 of 1) K15979 - staphylococcal nuclease domain-containing protein 1 (SND1); Transcriptional coactivator-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTATACGCTTGCGGATGAGCGCAATAGG
Internal bar code:ACTACGGGTACACCCAAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1139
LEAP-Seq percent confirming:99.6294
LEAP-Seq n confirming:12635
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGAGTTTCGTATCAGCC
Suggested primer 2:GAATGCACACTCCACACCAC