Insertion junction: LMJ.RY0402.217127_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.217127
Chromosome:chromosome 12
Location:4872133
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g525100 SMC6B (1 of 2) PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGATTCTGGTGTTGCAGCCGCCGCGG
Internal bar code:GGTGGGGCTGTGCACCACGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:465
LEAP-Seq percent confirming:99.8126
LEAP-Seq n confirming:14381
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTTTTGCAGTCGCACTA
Suggested primer 2:GTGTTGGGGTACCCAGATTG