Insertion junction: LMJ.RY0402.217129_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.217129
Chromosome:chromosome 13
Location:1405500
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g571950 (1 of 1) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGCGGCCGGGCGGCCTGATCGCCATT
Internal bar code:CTGTCTGTATTGATCTAGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:99.1915
LEAP-Seq n confirming:3067
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGCCAGTCCCAAGTATC
Suggested primer 2:TGGGGGAAATGGATGTTAAA