Insertion junction: LMJ.RY0402.217159_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.217159
Chromosome:chromosome 13
Location:3356826
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g586700 FXL2 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCGATACTGAAGCAATAGCTTCAACTA
Internal bar code:GCCGACCGGGCGGGCGAAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1333
LEAP-Seq percent confirming:99.7232
LEAP-Seq n confirming:7925
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTTCCAGACGACTCACC
Suggested primer 2:AACTGGAGCCGACTTGAAGA