Insertion junction: LMJ.RY0402.217184_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.217184
Chromosome:chromosome 9
Location:2788391
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389050 CNX5,MAW4 (1 of 2) PTHR16861//PTHR16861:SF4 - GLYCOPROTEIN 38 // PODOPLANIN; Membrane-associated hydroxyproline-rich glycoprotein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGCTGACCGTTGAAACATCCGGTCGG
Internal bar code:AGGTGAGCGCGAACGGAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:795
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGATGTCGGGTGTTGTG
Suggested primer 2:AGTTTGTCTGGTTCTGCGCT