Insertion junction: LMJ.RY0402.217644_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.217644
Chromosome:chromosome 1
Location:2765497
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g016450 (1 of 1) IPR000104//IPR001214//IPR002893 - Antifreeze protein, type I // SET domain // Zinc finger, MYND-type; SET domain protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGCAACCCTCCTCCTTACGGCCCGTG
Internal bar code:TGTCCAGGGAAATAGGACGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:79.731
LEAP-Seq n confirming:12627
LEAP-Seq n nonconfirming:3210
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGACCACCGATGTTGTG
Suggested primer 2:CGGTTACAGTGGCAGTAGCA