Insertion junction: LMJ.RY0402.217747_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.217747
Chromosome:chromosome 6
Location:3771612
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278159 CRCO,CO,CON1,CONSTANS CONSTANS-like protein involved in circadian rhythms; (1 of 1) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTCGAGAGAGAACAAAGCCTGCCCCC
Internal bar code:ACCGGTTGGAACGGGGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:655
LEAP-Seq percent confirming:98.7578
LEAP-Seq n confirming:159
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGCTGGAAGTACTGGA
Suggested primer 2:GCAATGAGACAGTCAAGGCA