Insertion junction: LMJ.RY0402.217766_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.217766
Chromosome:chromosome 3
Location:5375417
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGTGGTGGCGCCGCTGTGTGCTTGTA
Internal bar code:ATGACCCGCCCATTTTGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:975
LEAP-Seq percent confirming:99.1381
LEAP-Seq n confirming:4831
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTTCAGACCAGTCACCT
Suggested primer 2:GTCTACGACTCCAAGAGCGG