Insertion junction: LMJ.RY0402.218008_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.218008
Chromosome:chromosome 8
Location:3379548
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g374250 SAG1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Plus agglutinin protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGCGAAGTGTTGGAAGAGGGGCGCGG
Internal bar code:CTGGTACTGCCGGAACCGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:568
LEAP-Seq percent confirming:99.4318
LEAP-Seq n confirming:175
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCACTTGAACACACTG
Suggested primer 2:ACATACAACAGACGCCCTCC