Insertion junction: LMJ.RY0402.218025_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.218025
Chromosome:chromosome 4
Location:2848694
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g224300 CGL84 (1 of 22) PTHR10994 - RETICULON; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAGTGAGGATTGGAAGATGGCTTGCAGG
Internal bar code:GGGAGGTAAAATGCACATCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:925
LEAP-Seq percent confirming:98.4923
LEAP-Seq n confirming:2809
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTTGGGGTATCATGGAC
Suggested primer 2:ATGAGCACAGACCTTGGGAC