Insertion junction: LMJ.RY0402.218146_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.218146
Chromosome:chromosome 17
Location:27386
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g696300 (1 of 1) PTHR12360//PTHR12360:SF1 - NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 // NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCCTCTCCTGTCAGCTTGCCGCCTCC
Internal bar code:GATAGCCCTCGCACTCGTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:99.7979
LEAP-Seq n confirming:4938
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAGTTGAACAGCGATA
Suggested primer 2:TACGCGACGTAGTATCAGCG