Insertion junction: LMJ.RY0402.218180_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.218180
Chromosome:chromosome 16
Location:2374566
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g659950 PRPS5 Chloroplast Ribosomal Protein S5; (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCGGCACGGCAGCAGTTTTTGGCATTT
Internal bar code:TATGGATGCGACACTGCGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:6
LEAP-Seq percent confirming:97.5052
LEAP-Seq n confirming:938
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGGAATTGGGGAACTC
Suggested primer 2:ACCAGATCTACAACACCGCC