Insertion junction: LMJ.RY0402.218237_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.218237
Chromosome:chromosome 9
Location:636898
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g403350 (1 of 1) IPR000357//IPR016024//IPR021133 - HEAT repeat // Armadillo-type fold // HEAT, type 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACACTCATACAGGTTGAAAGGAAAACAA
Internal bar code:AGCCCCGCCGTTGTTGTCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:98.559
LEAP-Seq n confirming:2257
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGGAAGCACTGTAGCGG
Suggested primer 2:AGCTGCTACAGCAACCACAG