Insertion junction: LMJ.RY0402.218454_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.218454
Chromosome:chromosome 12
Location:1484801
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g487500 CGL61,NYE1, SGR1 Chlorophyll a dechelatase; (1 of 1) PTHR31750//PTHR31750:SF4 - FAMILY NOT NAMED // PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAAGGGAGCAGTGCAATTGGACGGTGC
Internal bar code:GTCGCAGCTGACAACGGGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:98.9078
LEAP-Seq n confirming:9961
LEAP-Seq n nonconfirming:110
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCTCGGTGGAGTTCAGC
Suggested primer 2:CTGGCTAGCTGGTGGAAAAG