Insertion junction: LMJ.RY0402.218535_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.218535
Chromosome:chromosome 9
Location:6530290
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g407750 CGL130 Conserved in the Green Lineage gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCACTAAACTCTCGAAACCAGCGTATT
Internal bar code:GTATTAGAAGAGCATATTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1178
LEAP-Seq percent confirming:99.2481
LEAP-Seq n confirming:528
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCAATGCTGCTGTTGGA
Suggested primer 2:CTTAGACCACTCGGCCACAT