Insertion junction: LMJ.RY0402.218539_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.218539
Chromosome:chromosome 3
Location:3867088
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACAGCGTTGTACCAACCGCACCCACCCG
Internal bar code:CCAGCTCTGGCCACCTGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:99.5471
LEAP-Seq n confirming:1099
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGGAGAAACAGTTCCG
Suggested primer 2:CTGCTGTTCCTGACCGAAG