Insertion junction: LMJ.RY0402.218598_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.218598
Chromosome:chromosome 9
Location:863374
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTGGGGTCGCGAGTTGTCTGCGTGCAG
Internal bar code:GGGGAGCTTAGGTCCTTTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:99.28
LEAP-Seq n confirming:4964
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AATTTGATGCATAGGGCGAG
Suggested primer 2:TGAAGCTGAACCTGTTGTCG