Insertion junction: LMJ.RY0402.218738_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.218738
Chromosome:chromosome 7
Location:908386
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g318950 (1 of 1) IPR000008//IPR000104//IPR003072 - C2 domain // Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTCGTGTGTGGTCAGGTGTGCGATTG
Internal bar code:AATTTTCAAACTGTATTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:99.6056
LEAP-Seq n confirming:5809
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGTGATACTCCCTGGC
Suggested primer 2:TAGCGTCTCGCCTGTATGTG