Insertion junction: LMJ.RY0402.218809_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.218809
Chromosome:chromosome 9
Location:6274390
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g406448 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCTGATGATGCGTACTGTACATATCCT
Internal bar code:CGGGGATGCCGTATATCGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:99.6573
LEAP-Seq n confirming:4362
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTGCGGCTGCTGATATG
Suggested primer 2:GAGAACTGAAGCCGTTGAGG