Insertion junction: LMJ.RY0402.219150_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.219150
Chromosome:chromosome 16
Location:7488841
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g687294 FTRV1,FTRV Ferredoxin Thioredoxin reductase, variable subunit%252C chloroplastic; (1 of 1) PTHR10949//PTHR10949:SF11 - LIPOYL SYNTHASE // SUBFAMILY NOT NAMED 3'UTR
Cre16.g687406 POB20 Proteome of basal body 20 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTAACCCAGAACCATCAATTCTTTAATA
Internal bar code:TCCTCAATGCGCGGGCAACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:99.6657
LEAP-Seq n confirming:3279
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAAGGACGTCACCCACT
Suggested primer 2:CGCTCGCTTGTCTACTACCC