Insertion junction: LMJ.RY0402.219638_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.219638
Chromosome:chromosome 12
Location:3357526
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g497350 PPR13 PentatricoPeptide Repeat protein 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCCAGCCCCAACACGCAGTTTCGCCTA
Internal bar code:CTTGGATAGGCGTATGGTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:90.5677
LEAP-Seq n confirming:3111
LEAP-Seq n nonconfirming:324
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTTCTGCTGCTGAGTT
Suggested primer 2:AGAATGGCCTCGTCATCATC