Insertion junction: LMJ.RY0402.219638_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.219638
Chromosome:chromosome 12
Location:3357532
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g497350 PPR13 PentatricoPeptide Repeat protein 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGTCACAAGCCTCGAGGCTGCAGATGCA
Internal bar code:TGCTGATTCCTTCACGCCTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:99.2722
LEAP-Seq n confirming:3410
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTTCTGCTGCTGAGTT
Suggested primer 2:AGAATGGCCTCGTCATCATC