Insertion junction: LMJ.RY0402.219698_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.219698
Chromosome:chromosome 10
Location:775687
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g423050 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCATAGCCACAGCCCATGAGCGGTACGC
Internal bar code:GTCACCCGGTTGGAGAGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:98.9455
LEAP-Seq n confirming:3284
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTCTACCCCAACGTGGT
Suggested primer 2:GGCGGCAATCTAGATGAGAG